EnhancerDB
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  3. rs78245447[chr12:122935599]
Enhancers that have rs78245447[chr12:122935599]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 122929045 122955735 enh15070
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Blood (OCI-LY7) Placenta Colon (HCT116) Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Thymus Epithelial (MCF-7)
Transcript factors that have rs78245447[chr12:122935599]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 122935020 122935730 TCF7L2 GTRD no Colon (HCT116) 21579816
chr12 122935055 122935812 ZNF274 GTRD no Cervix (HeLa-S3) 21579817
chr12 122935063 122935681 ZNF143 GTRD no Epithelial (MCF-7) 21579818
chr12 122935134 122935755 TCF7L2 GTRD no Colon (HCT116) 21579819
chr12 122935300 122935885 ZNF143 GTRD no Epithelial (MCF-7) 21579821
chr12 122935596 122935607 FOXC1 JASPAR yes 124280562
chr12 122935597 122935601 YY1 TRANSFAC yes 124280563
chr12 122935598 122935613 STAT1 JASPAR yes 124280564
Genes associated with rs78245447[chr12:122935599], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More