EnhancerDB
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  3. rs78280534[chr18:57573715]
Enhancers that have rs78280534[chr18:57573715]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 57569615 57596800 enh4881
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Placenta Colon (HCT116) Thyroid Blood (Karpas-422) Lung (PC-9) Pancreas Muscle (Myotube) Thymus Epithelial (MCF-7)
Transcript factors that have rs78280534[chr18:57573715]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 57573709 57573727 IRF2 JASPAR yes 111062654
chr18 57573710 57573731 IRF1 JASPAR yes 111062655
chr18 57573712 57573727 PRDM1 JASPAR yes 111062656
chr18 57573712 57573727 STAT2 JASPAR yes 111062657
chr18 57573713 57573727 STAT1 JASPAR yes 111062658
chr18 57573714 57573728 IRF8 JASPAR yes 111062659
chr18 57573714 57573729 IRF9 JASPAR yes 111062660
Genes associated with rs78280534[chr18:57573715], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More