EnhancerDB
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  3. rs78325112[chr1:42221011]
Enhancers that have rs78325112[chr1:42221011]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42213671 42252455 enh291
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs78325112[chr1:42221011]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42221000 42221013 POU2F2 JASPAR yes 28417974
chr1 42221007 42221018 CDX2 JASPAR yes 28417975
chr1 42221007 42221018 RUNX1 JASPAR yes 28417976
chr1 42221008 42221019 HOXA10 JASPAR yes 28417977
chr1 42221009 42221018 CDX1 JASPAR yes 28417978
chr1 42221009 42221019 HOXA13 JASPAR yes 28417979
chr1 42221009 42221019 HOXB13 JASPAR yes 28417980
chr1 42221011 42221025 POU4F1 JASPAR yes 28417981
Genes associated with rs78325112[chr1:42221011], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More