EnhancerDB
  1. Home
  2. SNP
  3. rs78392339[chr1:28389818]
Enhancers that have rs78392339[chr1:28389818]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 28387565 28408035 enh180
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Colon (HCT116) Thyroid Peripheral Blood (MM.1S) Blood (Karpas-422) Heart
Transcript factors that have rs78392339[chr1:28389818]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 28389813 28389824 FOXC1 JASPAR yes 27735578
chr1 28389814 28389818 YY1 TRANSFAC yes 27735579
chr1 28389815 28389830 FOXP1 JASPAR yes 27735580
chr1 28389815 28389836 IRF1 JASPAR yes 27735581
chr1 28389817 28389832 FOXP1 JASPAR yes 27735582
Genes associated with rs78392339[chr1:28389818], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More