EnhancerDB
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  3. rs78397201[chr1:201473185]
Enhancers that have rs78397201[chr1:201473185]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201463125 201475335 enh12520
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Large Intestine Bone (Osteoblast) Lung Blood (OCI-LY7) Placenta Muscle (Myoblast) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Heart
Transcript factors that have rs78397201[chr1:201473185]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201472419 201473672 POLR2A UCSC Txn Factor no Conserved 107856482
chr1 201472618 201473255 EP300 UCSC Txn Factor no Conserved 107856509
chr1 201472715 201473255 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107856541
chr1 201473180 201473191 HOXC13 JASPAR yes 34499450
Genes associated with rs78397201[chr1:201473185], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More