EnhancerDB
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  3. rs78428979[chr12:117077013]
Enhancers that have rs78428979[chr12:117077013]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 117071425 117078496 enh57625
Stomach Liver (HepG2) Epithelial (MCF-7) Lung (A549)
Transcript factors that have rs78428979[chr12:117077013]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 117076500 117077801 ZNF274 GTRD no Bone Marrow (K562) 108061890
chr12 117076586 117077495 ZNF143 GTRD no Epithelial (MCF-7) 21577896
chr12 117076586 117077495 ZNF143 GTRD no Epithelial (MCF-7) 108061891
chr12 117076593 117077221 ZNF143 GTRD no Epithelial (MCF-7) 21577897
chr12 117076593 117077221 ZNF143 GTRD no Epithelial (MCF-7) 108061892
chr12 117076685 117077475 ZNF274 GTRD no Cervix (HeLa-S3) 108061893
chr12 117076726 117077539 ZNF143 GTRD no Epithelial (MCF-7) 21577898
chr12 117076726 117077539 ZNF143 GTRD no Epithelial (MCF-7) 108061894
chr12 117076766 117077410 ZNF143 GTRD no Epithelial (MCF-7) 21577899
chr12 117076766 117077410 ZNF143 GTRD no Epithelial (MCF-7) 108061895
chr12 117076797 117077510 ZNF143 GTRD no Epithelial (MCF-7) 21577900
chr12 117076797 117077510 ZNF143 GTRD no Epithelial (MCF-7) 108061896
chr12 117076833 117077623 ZNF274 GTRD no Cervix (HeLa-S3) 108061897
chr12 117076844 117077694 ZNF143 GTRD no Epithelial (MCF-7) 21577901
chr12 117076844 117077694 ZNF143 GTRD no Epithelial (MCF-7) 108061898
chr12 117076887 117077523 SOX2 GTRD no Neural Stem Cells (H9) 108061899
chr12 117076893 117077379 ZNF143 GTRD no Epithelial (MCF-7) 21577902
chr12 117076893 117077379 ZNF143 GTRD no Epithelial (MCF-7) 108061900
chr12 117076895 117077125 TCF7L2 GTRD no Colon (HCT116) 108061901
chr12 117076940 117077242 SOX2 GTRD no Neural Stem Cells (H9) 108061902
chr12 117076968 117077279 SOX2 GTRD no Neural Stem Cells (H9) 108061903
chr12 117077008 117077019 FOXH1 JASPAR yes 124017337
chr12 117077009 117077015 ZNF354C JASPAR yes 124017338
chr12 117077012 117077017 NFY TRANSFAC yes 124017339
Genes associated with rs78428979[chr12:117077013], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More