EnhancerDB
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  3. rs78489240[chr1:165803950]
Enhancers that have rs78489240[chr1:165803950]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 165800587 165834795 enh699
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs78489240[chr1:165803950]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 165803940 165803961 IRF1 JASPAR yes 32800992
chr1 165803944 165803965 IRF1 JASPAR yes 32800993
chr1 165803948 165803969 IRF1 JASPAR yes 32800994
chr1 165803950 165803965 PRDM1 JASPAR yes 32800995
chr1 165803950 165803965 STAT2 JASPAR yes 32800996
Genes associated with rs78489240[chr1:165803950], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More