EnhancerDB
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  3. rs78501539[chr3:189431642]
Enhancers that have rs78501539[chr3:189431642]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 189426058 189435655 enh36256
Skin (Keratinocyte) Prostate (PC-3) Brain (SK-N-MC) Lung (PC-9) Esophagus Astrocyte Liver Bone (Osteoblast) Lung (A549) Blood (GM12878) Muscle (A673) Muscle (Myoblast) Breast Pancreas (Panc1) Muscle (Myotube) Kidney
Transcript factors that have rs78501539[chr3:189431642]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 189431631 189431642 CDX2 JASPAR yes 8585315
chr3 189431632 189431643 HOXA10 JASPAR yes 8585317
chr3 189431633 189431642 CDX1 JASPAR yes 8585318
chr3 189431633 189431643 HOXA13 JASPAR yes 8585319
chr3 189431633 189431643 HOXD13 JASPAR yes 8585320
chr3 189431634 189431645 PROP1 JASPAR yes 8585321
Genes associated with rs78501539[chr3:189431642], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More