EnhancerDB
  1. Home
  2. SNP
  3. rs78552390[chr5:79422059]
Enhancers that have rs78552390[chr5:79422059]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 79419665 79426220 enh22391
Prostate (PC-3) Brain (SK-N-MC) Large Intestine Astrocyte Bone (Osteoblast) Placenta Muscle (Myotube) Neural Stem Cells (H9)
chr5 79421543 79422183 vista48204
VISTA
Transcript factors that have rs78552390[chr5:79422059]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 79421658 79422315 NFIC UCSC Txn Factor no Conserved 108535530
chr5 79421721 79422359 RUNX3 UCSC Txn Factor no Conserved 108535531
chr5 79421768 79422407 ATF2 UCSC Txn Factor no Conserved 108535532
chr5 79421775 79422169 EP300 UCSC Txn Factor no Conserved 108535533
chr5 79421817 79422093 BATF UCSC Txn Factor no Conserved 108535534
chr5 79421821 79422101 IRF4 UCSC Txn Factor no Conserved 108535535
chr5 79421827 79422112 BCL11A UCSC Txn Factor no Conserved 108535536
chr5 79421833 79422100 SPI1 UCSC Txn Factor no Conserved 108535537
chr5 79422054 79422064 MSC JASPAR yes 63697771
chr5 79422054 79422064 MSC JASPAR yes 70671138
Genes associated with rs78552390[chr5:79422059], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More