EnhancerDB
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  3. rs78553616[chr1:222132711]
Enhancers that have rs78553616[chr1:222132711]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 222129374 222148777 enh27556
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Astrocyte Lung (A549) Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs78553616[chr1:222132711]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 222132705 222132715 HOXB13 JASPAR yes 35585606
chr1 222132705 222132715 HOXD13 JASPAR yes 35585607
chr1 222132705 222132716 HOXA10 JASPAR yes 35585608
chr1 222132708 222132718 CUX1 JASPAR yes 35585609
chr1 222132708 222132718 CUX2 JASPAR yes 35585610
Genes associated with rs78553616[chr1:222132711], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More