EnhancerDB
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  3. rs78560266[chr17:41775539]
Enhancers that have rs78560266[chr17:41775539]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 41766774 41782454 enh32199
Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs78560266[chr17:41775539]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 41772237 41779348 ZBTB33 GTRD no Lung (A549) 108261567
chr17 41775329 41775573 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21761461
chr17 41775443 41775800 SOX2 GTRD no Neural Stem Cells (H9) 21761462
chr17 41775468 41775825 SOX2 GTRD no Neural Stem Cells (H9) 21761463
chr17 41775531 41775546 AR JASPAR yes 54368472
Genes associated with rs78560266[chr17:41775539], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More