EnhancerDB
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  3. rs78561538[chr1:17454366]
Enhancers that have rs78561538[chr1:17454366]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 17446485 17458935 enh11552
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Muscle (A673) Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9)
Transcript factors that have rs78561538[chr1:17454366]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 17454021 17455429 TCF7L2 GTRD no Colon (HCT116) 107802251
chr1 17454349 17454367 MAFF JASPAR yes 27070425
chr1 17454351 17454372 MAFG JASPAR yes 27070426
chr1 17454359 17454375 SOX8 JASPAR yes 27070427
Genes associated with rs78561538[chr1:17454366], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More