EnhancerDB
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  3. rs78611180[chr1:223355138]
Enhancers that have rs78611180[chr1:223355138]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 223346429 223358855 enh12705
Prostate (PC-3) Brain (SK-N-MC) Esophagus Stomach Muscle (A673) Placenta Lung (PC-9) Pancreas Spleen Epithelial (MCF-7)
Transcript factors that have rs78611180[chr1:223355138]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 223355119 223355140 IRF1 JASPAR yes 35645867
chr1 223355125 223355146 IRF1 JASPAR yes 35645869
chr1 223355126 223355147 IRF1 JASPAR yes 35645870
chr1 223355127 223355142 STAT2 JASPAR yes 35645871
chr1 223355131 223355152 IRF1 JASPAR yes 35645872
chr1 223355132 223355138 TCF4 TRANSFAC yes 35645873
chr1 223355132 223355147 FOXP1 JASPAR yes 35645874
chr1 223355133 223355144 FOXP2 JASPAR yes 35645875
chr1 223355133 223355145 FOXC2 JASPAR yes 35645876
chr1 223355133 223355148 STAT2 JASPAR yes 35645877
chr1 223355134 223355149 FOXP1 JASPAR yes 35645878
chr1 223355136 223355151 FOXP1 JASPAR yes 35645879
Genes associated with rs78611180[chr1:223355138], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More