EnhancerDB
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  3. rs78643399[chr10:28663573]
Enhancers that have rs78643399[chr10:28663573]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr10 28652705 28673755 enh13080
Prostate (PC-3) Liver (HepG2) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Blood (T-cell) Blood (OCI-LY7) Stomach Placenta Colon (HCT116) Peripheral Blood (MM.1S) Pancreas Thymus Epithelial (MCF-7)
Transcript factors that have rs78643399[chr10:28663573]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr10 28663358 28663763 ZNF143 GTRD no Epithelial (MCF-7) 21422976
chr10 28663472 28664547 ZNF143 GTRD no Epithelial (MCF-7) 21422977
chr10 28663489 28664351 ZNF143 GTRD no Epithelial (MCF-7) 21422978
chr10 28663489 28664465 ZNF143 GTRD no Epithelial (MCF-7) 21422979
chr10 28663521 28664425 ZNF143 GTRD no Epithelial (MCF-7) 21422980
chr10 28663522 28664343 ZNF143 GTRD no Epithelial (MCF-7) 21422981
chr10 28663524 28663781 ZNF143 GTRD no Epithelial (MCF-7) 21422982
chr10 28663568 28663579 CEBPB JASPAR yes 126227246
chr10 28663569 28663580 CEBPA JASPAR yes 126227247
Genes associated with rs78643399[chr10:28663573], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More