EnhancerDB
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  3. rs78648096[chr1:218571727]
Enhancers that have rs78648096[chr1:218571727]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 218562007 218578395 enh12671
Prostate (PC-3) Liver (HepG2) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Lung (PC-9) Astrocyte Bone (Osteoblast) Stomach Placenta Colon (HCT116) Muscle (Myoblast) Pancreas Epithelial (MCF-7)
Transcript factors that have rs78648096[chr1:218571727]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 218571713 218571728 FOXP1 JASPAR yes 35376281
chr1 218571716 218571727 FOXP2 JASPAR yes 35376283
chr1 218571716 218571730 ONECUT3 JASPAR yes 35376284
chr1 218571718 218571727 SRY JASPAR yes 35376287
chr1 218571720 218571729 SOX9 JASPAR yes 35376288
chr1 218571727 218571733 GATA3 JASPAR yes 35376289
Genes associated with rs78648096[chr1:218571727], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More