EnhancerDB
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  3. rs78648272[chr1:172715590]
Enhancers that have rs78648272[chr1:172715590]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172711957 172718375 enh730
Prostate (PC-3) Large Intestine Blood (T-cell) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Lung Blood (OCI-LY7) Lung (A549) Stomach Placenta Colon (HCT116) Blood (Karpas-422) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Thymus Epithelial (MCF-7)
chr1 172715484 172715760 vista3903
VISTA
Transcript factors that have rs78648272[chr1:172715590]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172715305 172715935 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107845969
chr1 172715332 172715922 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107845970
chr1 172715336 172715932 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 107845971
chr1 172715347 172715943 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107845972
chr1 172715382 172715932 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107845973
chr1 172715384 172715960 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21350224
chr1 172715384 172715960 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107845974
chr1 172715389 172715905 CEBPB UCSC Txn Factor no Conserved 107845975
chr1 172715389 172715905 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107845976
chr1 172715391 172715931 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21350225
chr1 172715391 172715931 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107845977
chr1 172715392 172715796 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107845978
chr1 172715407 172715777 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107845979
chr1 172715412 172715816 RUNX3 UCSC Txn Factor no Conserved 107845980
chr1 172715412 172715816 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107845981
chr1 172715415 172715804 NFIC UCSC Txn Factor no Conserved 107845982
chr1 172715415 172715804 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107845983
chr1 172715419 172715775 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107845984
chr1 172715420 172715796 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21350226
chr1 172715420 172715796 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 107845985
chr1 172715425 172715821 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107845986
chr1 172715430 172715734 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107845987
chr1 172715433 172715843 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107845988
chr1 172715436 172715976 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21350227
chr1 172715436 172715976 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107845989
chr1 172715442 172715752 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107845990
chr1 172715444 172715800 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107845991
chr1 172715446 172715776 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107845992
chr1 172715447 172715831 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107845993
chr1 172715449 172715805 IRF1 UCSC Txn Factor no Conserved 107845994
chr1 172715451 172715771 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107845995
chr1 172715458 172715728 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21350228
chr1 172715458 172715728 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 107845996
chr1 172715459 172715779 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107845997
chr1 172715465 172715655 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107845998
chr1 172715466 172715730 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107845999
chr1 172715468 172715758 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846000
chr1 172715469 172715749 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846001
chr1 172715471 172715781 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846002
chr1 172715473 172715733 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846003
chr1 172715473 172715925 TCF12 UCSC Txn Factor no Conserved 107846004
chr1 172715474 172715800 MTA3 UCSC Txn Factor no Conserved 107846005
chr1 172715474 172715800 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846006
chr1 172715477 172715961 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21350229
chr1 172715477 172715961 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107846007
chr1 172715486 172716423 P63 GTRD no Skin (Keratinocyte) 107846008
chr1 172715488 172715752 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846009
chr1 172715488 172715777 ATF2 UCSC Txn Factor no Conserved 107846010
chr1 172715488 172715777 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846011
chr1 172715492 172715925 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21350230
chr1 172715492 172715925 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107846012
chr1 172715497 172715777 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21350231
chr1 172715497 172715777 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 107846013
chr1 172715499 172715848 NR3C1 UCSC Txn Factor no Conserved 107846014
chr1 172715502 172715758 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107846015
chr1 172715508 172715757 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 107846016
chr1 172715508 172716453 P63 GTRD no Skin (Keratinocyte) 107846017
chr1 172715510 172715786 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107846018
chr1 172715512 172715756 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107846019
chr1 172715513 172715797 FOS UCSC Txn Factor no Conserved 107846020
chr1 172715513 172715797 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107846021
chr1 172715515 172715795 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107846022
chr1 172715515 172715808 JUND UCSC Txn Factor no Conserved 107846023
chr1 172715519 172715791 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21350232
chr1 172715519 172715791 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107846024
chr1 172715521 172715777 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21350233
chr1 172715521 172715777 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107846025
chr1 172715522 172715906 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21350234
chr1 172715522 172715906 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107846026
chr1 172715523 172715819 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846027
chr1 172715528 172715746 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107846028
chr1 172715530 172715810 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107846029
chr1 172715532 172715808 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107846030
chr1 172715535 172715836 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21350235
chr1 172715535 172715836 FOSL2 UCSC Txn Factor no Conserved 107846031
chr1 172715535 172715836 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107846032
chr1 172715536 172715754 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846033
chr1 172715539 172716035 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21350236
chr1 172715539 172716035 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107846034
chr1 172715541 172716456 P63 GTRD no Skin (Keratinocyte) 107846035
chr1 172715545 172715652 TEAD4 UCSC Txn Factor no Conserved 107846036
chr1 172715545 172715652 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107846037
chr1 172715551 172715811 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107846038
chr1 172715556 172715735 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846039
chr1 172715566 172715796 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107846040
chr1 172715580 172715592 NHLH1 JASPAR yes 33150948
chr1 172715580 172715592 NHLH1 JASPAR yes 118399568
chr1 172715581 172715591 NHLH1 JASPAR yes 33150949
chr1 172715581 172715591 NHLH1 JASPAR yes 118399569
chr1 172715587 172715728 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21350237
chr1 172715587 172715728 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 107846041
chr1 172715587 172715801 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107846042
Genes associated with rs78648272[chr1:172715590], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More