EnhancerDB
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  3. rs78684012[chr2:75831423]
Enhancers that have rs78684012[chr2:75831423]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 75813119 75843795 enh18695
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Kidney Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Lung (PC-9) Astrocyte Brain (SK-N-MC) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Placenta Muscle (Myoblast) Pancreas Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs78684012[chr2:75831423]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 75831421 75831431 EMX2 JASPAR yes 75152951
chr2 75831421 75831431 EN2 JASPAR yes 75152952
chr2 75831421 75831431 ESX1 JASPAR yes 75152953
chr2 75831421 75831431 GBX1 JASPAR yes 75152954
chr2 75831421 75831431 GBX2 JASPAR yes 75152955
chr2 75831421 75831431 HESX1 JASPAR yes 75152956
chr2 75831421 75831431 LBX2 JASPAR yes 75152957
chr2 75831421 75831431 LHX2 JASPAR yes 75152958
chr2 75831421 75831431 RAX JASPAR yes 75152959
chr2 75831421 75831435 RORA JASPAR yes 75152960
chr2 75831422 75831426 H1TF2 TRANSFAC yes 75152961
chr2 75831422 75831426 NFE TRANSFAC yes 75152962
chr2 75831422 75831426 SRF TRANSFAC yes 75152963
chr2 75831422 75831430 BARX1 JASPAR yes 75152964
chr2 75831422 75831430 BSX JASPAR yes 75152965
chr2 75831422 75831430 EN1 JASPAR yes 75152966
chr2 75831422 75831430 ISX JASPAR yes 75152967
chr2 75831422 75831430 LHX9 JASPAR yes 75152968
chr2 75831422 75831430 MSX1 JASPAR yes 75152969
chr2 75831422 75831430 MSX2 JASPAR yes 75152970
chr2 75831422 75831430 PRRX1 JASPAR yes 75152971
chr2 75831422 75831430 RAX2 JASPAR yes 75152972
chr2 75831422 75831430 SHOX JASPAR yes 75152973
Genes associated with rs78684012[chr2:75831423], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More