-
Home
- SNP
- rs78700563[chr16:2897498]
Enhancers that have rs78700563[chr16:2897498]
Back to top
| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr16 |
2883745 |
2901765 |
enh16505 |
|
|
Transcript factors that have rs78700563[chr16:2897498]
Back to top
| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr16
|
2896055
|
2898320
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21685235
|
|
|
chr16
|
2896073
|
2898314
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21685236
|
|
|
chr16
|
2896443
|
2899148
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
21685240
|
|
|
chr16
|
2897195
|
2898599
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21685252
|
|
|
chr16
|
2897232
|
2897805
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21685253
|
|
|
chr16
|
2897485
|
2897503
|
RARA
|
JASPAR
|
yes
|
|
9193437
|
|
|
chr16
|
2897486
|
2897504
|
ESR2
|
JASPAR
|
yes
|
|
9193438
|
|
|
chr16
|
2897489
|
2897503
|
RXRB
|
JASPAR
|
yes
|
|
9193439
|
|
|
chr16
|
2897489
|
2897503
|
RXRG
|
JASPAR
|
yes
|
|
9193440
|
|
|
chr16
|
2897495
|
2897509
|
RORA
|
JASPAR
|
yes
|
|
9193441
|
|
Genes associated with rs78700563[chr16:2897498], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |