EnhancerDB
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  3. rs78723029[chr12:54262298]
Enhancers that have rs78723029[chr12:54262298]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 54259293 54267755 enh43744
Cervix (HeLa-S3) Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs78723029[chr12:54262298]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 54261249 54263144 ZNF274 GTRD no Cervix (HeLa-S3) 21550126
chr12 54261465 54263029 ZNF274 GTRD no Cervix (HeLa-S3) 21550144
chr12 54261485 54263197 ZNF274 GTRD no Cervix (HeLa-S3) 21550149
chr12 54261491 54263244 ZNF274 GTRD no Cervix (HeLa-S3) 21550151
chr12 54261547 54263150 ZNF274 GTRD no Cervix (HeLa-S3) 21550156
chr12 54261626 54263213 ZNF274 GTRD no Cervix (HeLa-S3) 21550160
chr12 54261647 54263126 ZNF274 GTRD no Cervix (HeLa-S3) 21550161
chr12 54261715 54263208 ZNF274 GTRD no Cervix (HeLa-S3) 21550162
chr12 54261736 54263026 ZNF274 GTRD no Cervix (HeLa-S3) 21550163
chr12 54261850 54263051 TCF7L2 GTRD no Colon (HCT116) 21550164
chr12 54261990 54263075 ZNF274 GTRD no Cervix (HeLa-S3) 21550165
chr12 54262038 54262972 ZNF274 GTRD no Cervix (HeLa-S3) 21550166
chr12 54262042 54263022 ZNF274 GTRD no Cervix (HeLa-S3) 21550167
chr12 54262043 54263049 ZNF274 GTRD no Cervix (HeLa-S3) 21550168
chr12 54262134 54262883 ZNF143 GTRD no Epithelial (MCF-7) 21550169
chr12 54262166 54262852 ZNF143 GTRD no Epithelial (MCF-7) 21550170
chr12 54262173 54262629 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21550171
chr12 54262194 54263066 ZNF143 GTRD no Epithelial (MCF-7) 21550172
chr12 54262218 54263103 ZNF143 GTRD no Epithelial (MCF-7) 21550173
chr12 54262219 54262803 ZNF143 GTRD no Epithelial (MCF-7) 21550174
chr12 54262239 54263008 ZNF274 GTRD no Cervix (HeLa-S3) 21550175
chr12 54262241 54263016 ZNF143 GTRD no Epithelial (MCF-7) 21550176
chr12 54262247 54263179 ZNF143 GTRD no Epithelial (MCF-7) 21550177
chr12 54262255 54262875 ZNF143 GTRD no Epithelial (MCF-7) 21550178
chr12 54262259 54263169 ZNF143 GTRD no Epithelial (MCF-7) 21550179
chr12 54262260 54262911 ZNF143 GTRD no Epithelial (MCF-7) 21550180
chr12 54262271 54262998 ZNF143 GTRD no Epithelial (MCF-7) 21550181
chr12 54262274 54263029 ZNF143 GTRD no Epithelial (MCF-7) 21550182
chr12 54262280 54262684 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21550183
chr12 54262283 54263111 ZNF143 GTRD no Epithelial (MCF-7) 21550184
chr12 54262291 54262305 TCF7L2 JASPAR yes 121015633
chr12 54262294 54262986 ZNF143 GTRD no Epithelial (MCF-7) 21550185
chr12 54262298 54262990 ZNF274 GTRD no Cervix (HeLa-S3) 21550186
Genes associated with rs78723029[chr12:54262298], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More