EnhancerDB
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  3. rs78819541[chr1:117030118]
Enhancers that have rs78819541[chr1:117030118]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 117004485 117055235 enh585
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs78819541[chr1:117030118]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 117029073 117030978 ZNF274 GTRD no Bone Marrow (K562) 21332995
chr1 117029073 117030978 ZNF274 GTRD no Bone Marrow (K562) 107824318
chr1 117029347 117030407 ZNF274 GTRD no Bone Marrow (K562) 21333004
chr1 117029386 117030266 ZNF274 GTRD no Bone Marrow (K562) 21333005
chr1 117029625 117030181 ZNF274 GTRD no Bone Marrow (K562) 21333006
chr1 117029651 117030204 ZNF274 GTRD no Bone Marrow (K562) 21333009
chr1 117030116 117030587 ZNF143 GTRD no Epithelial (MCF-7) 21333013
Genes associated with rs78819541[chr1:117030118], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More