EnhancerDB
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  3. rs78827376[chr1:200269932]
Enhancers that have rs78827376[chr1:200269932]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 200249825 200279179 enh867
Prostate (PC-3) Liver (HepG2) Blood (OCI-LY7) Blood (GM12878) Stomach Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Pancreas (Panc1) Epithelial (MCF-7)
Transcript factors that have rs78827376[chr1:200269932]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 200269925 200269940 LEF1 JASPAR yes 34431674
chr1 200269932 200269942 TBX21 JASPAR yes 34431675
chr1 200269932 200269943 TBX20 JASPAR yes 34431676
chr1 200269932 200269943 TBX2 JASPAR yes 34431677
chr1 200269932 200269945 EOMES JASPAR yes 34431678
Genes associated with rs78827376[chr1:200269932], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More