EnhancerDB
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  3. rs78869581[chr1:19978957]
Enhancers that have rs78869581[chr1:19978957]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19973102 19981178 enh11574
Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Bone (Osteoblast) Lung Stomach Muscle (A673) Placenta Colon (HCT116) Spleen Thymus Heart
Transcript factors that have rs78869581[chr1:19978957]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19978947 19978962 ZIC3 JASPAR yes 27209203
chr1 19978947 19978962 ZIC4 JASPAR yes 27209204
chr1 19978948 19978958 SP1 JASPAR yes 27209205
chr1 19978948 19978962 GLIS2 JASPAR yes 27209206
chr1 19978948 19978962 ZIC1 JASPAR yes 27209207
chr1 19978951 19978957 SP1 TRANSFAC yes 27209209
chr1 19978951 19978961 SP1 JASPAR yes 27209210
chr1 19978952 19978962 ZNF740 JASPAR yes 27209211
chr1 19978956 19978974 NR3C1 JASPAR yes 27209212
chr1 19978957 19978972 ESR2 JASPAR yes 27209213
Genes associated with rs78869581[chr1:19978957], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More