EnhancerDB
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  3. rs78898315[chr19:14661399]
Enhancers that have rs78898315[chr19:14661399]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 14658964 14673635 enh5022
Astrocyte Colon (HCT116) Blood (Karpas-422) Blood (T-cell) Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr19 14661096 14661426 vista28765
VISTA
Transcript factors that have rs78898315[chr19:14661399]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 14660967 14661431 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21853729
chr19 14660967 14661431 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108391954
chr19 14660998 14661654 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21853730
chr19 14660998 14661654 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108391958
chr19 14660999 14661495 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108391959
chr19 14661017 14661473 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108391961
chr19 14661120 14661490 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108391963
chr19 14661125 14661405 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108391964
chr19 14661158 14661562 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108391965
chr19 14661206 14661794 ZNF274 GTRD no Bone Marrow (K562) 108391967
chr19 14661215 14661860 ZNF274 GTRD no Blood (GM12878) 108391968
chr19 14661235 14661479 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108391969
chr19 14661250 14661440 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21853732
chr19 14661250 14661440 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108391970
chr19 14661305 14661617 ZNF274 GTRD no Bone Marrow (K562) 108391971
chr19 14661343 14661609 ZNF274 GTRD no Blood (GM12878) 108391972
chr19 14661353 14661855 ZNF274 GTRD no Bone Marrow (K562) 108391973
chr19 14661372 14661696 ZNF143 GTRD no Epithelial (MCF-7) 21853733
chr19 14661372 14661696 ZNF143 GTRD no Epithelial (MCF-7) 108391974
chr19 14661397 14661411 EBF1 JASPAR yes 70813622
chr19 14661397 14661411 EBF1 JASPAR yes 112578002
chr19 14661398 14661409 EBF1 JASPAR yes 70813623
chr19 14661398 14661409 EBF1 JASPAR yes 112578003
chr19 14661398 14661412 EBF1 JASPAR yes 70813624
chr19 14661398 14661412 EBF1 JASPAR yes 112578004
chr19 14661399 14661411 TFAP2B JASPAR yes 70813625
chr19 14661399 14661411 TFAP2C JASPAR yes 70813626
chr19 14661399 14661411 TFAP2B JASPAR yes 112578005
chr19 14661399 14661411 TFAP2C JASPAR yes 112578006
chr19 14661399 14661414 TFAP2A JASPAR yes 70813627
chr19 14661399 14661414 TFAP2C JASPAR yes 70813628
chr19 14661399 14661414 TFAP2A JASPAR yes 112578007
chr19 14661399 14661414 TFAP2C JASPAR yes 112578008
Genes associated with rs78898315[chr19:14661399], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More