EnhancerDB
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  3. rs78900938[chr11:2225827]
Enhancers that have rs78900938[chr11:2225827]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 2210565 2239175 enh13693
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Lung (A549) Stomach Placenta Breast Thyroid Lung (PC-9) Pancreas Spleen Muscle (Myotube) Blood (T-cell) Heart
Transcript factors that have rs78900938[chr11:2225827]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 2225752 2226236 ZNF274 GTRD no Liver (HepG2) 21466658
chr11 2225752 2226236 ZNF274 GTRD no Liver (HepG2) 107952784
chr11 2225769 2226161 ZNF274 GTRD no Liver (HepG2) 21466659
chr11 2225769 2226161 ZNF274 GTRD no Liver (HepG2) 107952785
chr11 2225819 2225834 ZIC3 JASPAR yes 36993209
chr11 2225819 2225834 ZIC4 JASPAR yes 36993210
chr11 2225820 2225834 GLIS2 JASPAR yes 36993211
chr11 2225820 2225834 ZIC1 JASPAR yes 36993212
chr11 2225824 2225834 ZNF740 JASPAR yes 36993213
chr11 2225826 2225837 NFKB1 JASPAR yes 36993214
Genes associated with rs78900938[chr11:2225827], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More