EnhancerDB
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  3. rs78922068[chr1:42419021]
Enhancers that have rs78922068[chr1:42419021]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42414541 42425761 enh26655
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Lung (PC-9) Astrocyte Bone (Osteoblast) Blood (GM12878) Colon (HCT116) Breast Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Pancreas (Panc1) Epithelial (MCF-7)
Transcript factors that have rs78922068[chr1:42419021]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42419016 42419026 EN2 JASPAR yes 28441387
chr1 42419016 42419026 GBX1 JASPAR yes 28441388
chr1 42419017 42419021 H1TF2 TRANSFAC yes 28441389
chr1 42419017 42419021 NFE TRANSFAC yes 28441390
chr1 42419017 42419021 SRF TRANSFAC yes 28441391
chr1 42419017 42419025 BSX JASPAR yes 28441392
chr1 42419017 42419025 DLX6 JASPAR yes 28441393
chr1 42419017 42419025 MSX1 JASPAR yes 28441394
chr1 42419017 42419025 MSX2 JASPAR yes 28441395
chr1 42419021 42419028 NKX3-1 JASPAR yes 28441396
Genes associated with rs78922068[chr1:42419021], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More