EnhancerDB
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  3. rs78929355[chr1:115678983]
Enhancers that have rs78929355[chr1:115678983]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 115674129 115687475 enh27085
Skin (Keratinocyte) Prostate (PC-3) Prostate (RWPE1) Ovary Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Muscle (Myoblast) Pancreas Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs78929355[chr1:115678983]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 115676068 115681505 ZNF143 GTRD no Epithelial (MCF-7) 21330665
chr1 115678645 115679460 ZNF143 GTRD no Epithelial (MCF-7) 21330673
chr1 115678651 115679329 ZNF143 GTRD no Epithelial (MCF-7) 21330674
chr1 115678826 115679498 ZNF143 GTRD no Epithelial (MCF-7) 21330675
chr1 115678898 115679538 ZNF143 GTRD no Epithelial (MCF-7) 21330676
chr1 115678910 115679470 ZNF143 GTRD no Epithelial (MCF-7) 21330677
chr1 115678978 115678993 HNF4G JASPAR yes 31710630
chr1 115678979 115678993 RXRB JASPAR yes 31710631
chr1 115678979 115678994 HNF4A JASPAR yes 31710632
chr1 115678981 115678985 LFA1 TRANSFAC yes 31710633
Genes associated with rs78929355[chr1:115678983], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More