EnhancerDB
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  3. rs78938278[chr1:52420332]
Enhancers that have rs78938278[chr1:52420332]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 52410065 52425504 enh361
Brain (SK-N-MC) Prostate (RWPE1) Bone (Osteoblast) Blood (OCI-LY7) Muscle (A673) Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Neural Stem Cells (H9)
Transcript factors that have rs78938278[chr1:52420332]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 52420324 52420336 POU3F1 JASPAR yes 28877676
chr1 52420324 52420336 POU3F2 JASPAR yes 28877677
chr1 52420324 52420337 POU3F3 JASPAR yes 28877678
chr1 52420324 52420341 ZNF410 JASPAR yes 28877679
chr1 52420325 52420335 NFATC3 JASPAR yes 28877680
chr1 52420325 52420337 POU2F1 JASPAR yes 28877681
chr1 52420326 52420333 NFATC2 JASPAR yes 28877682
chr1 52420328 52420344 POU4F2 JASPAR yes 28877683
chr1 52420331 52420342 HOXA10 JASPAR yes 28877684
chr1 52420332 52420341 CDX1 JASPAR yes 28877685
chr1 52420332 52420342 HOXA13 JASPAR yes 28877686
chr1 52420332 52420342 HOXD13 JASPAR yes 28877687
Genes associated with rs78938278[chr1:52420332], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More