EnhancerDB
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  3. rs78948338[chr1:201884458]
Enhancers that have rs78948338[chr1:201884458]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201879005 201889035 enh12530
Cervix (HeLa-S3) Brain (SK-N-SH) Epithelial (MCF-7) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Heart
Transcript factors that have rs78948338[chr1:201884458]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201879927 201884764 ZNF274 GTRD no Blood (GM12878) 107857150
chr1 201879954 201886120 ZBTB33 GTRD no Lung (A549) 107857151
chr1 201881372 201884972 ZNF274 GTRD no Bone Marrow (K562) 107857152
chr1 201881673 201889087 ZNF274 GTRD no Bone Marrow (K562) 107857153
chr1 201882315 201884582 ZNF274 GTRD no Bone Marrow (K562) 107857154
chr1 201882367 201884665 ZNF274 GTRD no Blood (GM12878) 107857157
chr1 201882375 201884839 ZNF274 GTRD no Blood (GM12878) 107857158
chr1 201882378 201884680 ZBTB33 GTRD no Lung (A549) 107857159
chr1 201882379 201884717 ZBTB33 GTRD no Lung (A549) 107857160
chr1 201882416 201884949 ZNF274 GTRD no Blood (GM12878) 107857165
chr1 201882417 201884468 ZNF274 GTRD no Bone Marrow (K562) 107857166
chr1 201882418 201884820 ZNF274 GTRD no Bone Marrow (K562) 107857167
chr1 201882451 201886182 ZNF274 GTRD no Cervix (HeLa-S3) 21365301
chr1 201882451 201886182 ZNF274 GTRD no Cervix (HeLa-S3) 107857176
chr1 201882461 201884632 ZNF274 GTRD no Bone Marrow (K562) 107857180
chr1 201883429 201884551 TCF7L2 GTRD no Colon (HCT116) 107857196
chr1 201883604 201884466 ZNF274 GTRD no Bone Marrow (K562) 107857210
chr1 201884458 201884464 YY1 JASPAR yes 34537236
chr1 201884458 201884471 ATF4 JASPAR yes 34537237
Genes associated with rs78948338[chr1:201884458], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More