EnhancerDB
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  3. rs78988890[chr2:204661237]
Enhancers that have rs78988890[chr2:204661237]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 204660585 204687955 enh19133
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Lung (PC-9) Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Placenta Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Spleen Thymus Stomach
Transcript factors that have rs78988890[chr2:204661237]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 204661220 204661241 IRF1 JASPAR yes 80265913
chr2 204661223 204661237 SPI1 JASPAR yes 80265914
chr2 204661223 204661237 SPIC JASPAR yes 80265915
chr2 204661228 204661243 PRDM1 JASPAR yes 80265916
chr2 204661234 204661245 PHOX2A JASPAR yes 80265917
chr2 204661237 204661247 EMX1 JASPAR yes 80265918
chr2 204661237 204661247 EMX2 JASPAR yes 80265919
chr2 204661237 204661247 GBX2 JASPAR yes 80265920
chr2 204661237 204661247 HOXB2 JASPAR yes 80265921
chr2 204661237 204661247 HOXB3 JASPAR yes 80265922
chr2 204661237 204661247 LHX6 JASPAR yes 80265923
chr2 204661237 204661247 MEOX1 JASPAR yes 80265924
chr2 204661237 204661247 MEOX2 JASPAR yes 80265925
chr2 204661237 204661247 MNX1 JASPAR yes 80265926
chr2 204661237 204661247 POU6F1 JASPAR yes 80265927
Genes associated with rs78988890[chr2:204661237], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More