EnhancerDB
  1. Home
  2. SNP
  3. rs79202052[chr1:178988586]
Enhancers that have rs79202052[chr1:178988586]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 178984125 178989295 enh12414
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Prostate (RWPE1) Brain (SK-N-SH) Esophagus Bone (Osteoblast) Lung Stomach Placenta Lung (PC-9) Pancreas Spleen Heart
Transcript factors that have rs79202052[chr1:178988586]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 178988572 178988593 IRF1 JASPAR yes 33461007
chr1 178988573 178988593 RREB1 JASPAR yes 33461008
chr1 178988574 178988589 STAT2 JASPAR yes 33461009
chr1 178988577 178988597 RREB1 JASPAR yes 33461010
chr1 178988578 178988593 FOXP1 JASPAR yes 33461011
chr1 178988578 178988598 RREB1 JASPAR yes 33461012
chr1 178988581 178988601 RREB1 JASPAR yes 33461013
chr1 178988585 178988591 TCF4 TRANSFAC yes 33461014
chr1 178988585 178988597 FOXI1 JASPAR yes 33461015
chr1 178988585 178988600 FOXP1 JASPAR yes 33461016
Genes associated with rs79202052[chr1:178988586], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More