EnhancerDB
  1. Home
  2. SNP
  3. rs79254366[chr1:42234199]
Enhancers that have rs79254366[chr1:42234199]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42213671 42252455 enh291
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs79254366[chr1:42234199]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42234188 42234201 POU3F3 JASPAR yes 28419879
chr1 42234188 42234202 POU1F1 JASPAR yes 28419880
chr1 42234196 42234204 HOXA5 JASPAR yes 28419881
Genes associated with rs79254366[chr1:42234199], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More