EnhancerDB
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  3. rs79319808[chr16:88558601]
Enhancers that have rs79319808[chr16:88558601]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88556185 88579980 enh52393
Bone Marrow (K562) Liver (HepG2) Brain (SK-N-SH) Epithelial (MCF-7) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Stomach Muscle (A673) Colon (HCT116) Pancreas Heart
Transcript factors that have rs79319808[chr16:88558601]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88557779 88559742 TCF7L2 GTRD no Colon (HCT116) 21736566
chr16 88557779 88559742 TCF7L2 GTRD no Colon (HCT116) 108222466
chr16 88557782 88558666 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21736567
chr16 88557782 88558666 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108222467
chr16 88557911 88558629 GATA1 UCSC Txn Factor no Conserved 108222473
chr16 88558003 88558647 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21736578
chr16 88558003 88558647 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108222483
chr16 88558046 88558744 GATA2 UCSC Txn Factor no Conserved 108222491
chr16 88558157 88559423 ZNF274 GTRD no Bone Marrow (K562) 21736609
chr16 88558157 88559423 ZNF274 GTRD no Bone Marrow (K562) 108222523
chr16 88558157 88559441 ZNF274 GTRD no Bone Marrow (K562) 21736610
chr16 88558157 88559441 ZNF274 GTRD no Bone Marrow (K562) 108222524
chr16 88558164 88558688 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21736611
chr16 88558164 88558688 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108222525
chr16 88558177 88558968 TCF7L2 GTRD no Colon (HCT116) 21736614
chr16 88558177 88558968 TCF7L2 GTRD no Colon (HCT116) 108222529
chr16 88558194 88558744 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21736615
chr16 88558194 88558744 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108222530
chr16 88558214 88559826 TCF7L2 GTRD no Colon (HCT116) 21736616
chr16 88558214 88559826 TCF7L2 GTRD no Colon (HCT116) 108222531
chr16 88558217 88559022 TCF7L2 GTRD no Colon (HCT116) 21736617
chr16 88558217 88559022 TCF7L2 GTRD no Colon (HCT116) 108222532
chr16 88558219 88558885 TCF7L2 GTRD no Colon (HCT116) 21736618
chr16 88558219 88558885 TCF7L2 GTRD no Colon (HCT116) 108222533
chr16 88558225 88559495 TCF7L2 GTRD no Colon (HCT116) 21736619
chr16 88558225 88559495 TCF7L2 GTRD no Colon (HCT116) 108222534
chr16 88558244 88559466 TCF7L2 GTRD no Colon (HCT116) 21736620
chr16 88558244 88559466 TCF7L2 GTRD no Colon (HCT116) 108222535
chr16 88558289 88558639 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21736621
chr16 88558289 88558639 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108222536
chr16 88558337 88559497 ZNF274 GTRD no Bone Marrow (K562) 21736622
chr16 88558337 88559497 ZNF274 GTRD no Bone Marrow (K562) 108222537
chr16 88558424 88559738 ZNF143 GTRD no Epithelial (MCF-7) 21736623
chr16 88558424 88559738 ZNF143 GTRD no Epithelial (MCF-7) 108222538
Genes associated with rs79319808[chr16:88558601], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More