EnhancerDB
  1. Home
  2. SNP
  3. rs79363088[chr19:6540188]
Enhancers that have rs79363088[chr19:6540188]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 6535385 6540520 enh4986
Prostate (PC-3) Cervix (HeLa-S3) Blood (OCI-LY7) Peripheral Blood (MM.1S) Colon (HCT116) Blood (Karpas-422) Lung (PC-9)
chr19 6539979 6540238 vista28439
VISTA
Transcript factors that have rs79363088[chr19:6540188]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 6533744 6540314 POLR2A UCSC Txn Factor no Conserved 108378505
chr19 6538551 6541544 ZNF274 GTRD no Blood (GM12878) 108378506
chr19 6538577 6540224 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108378508
chr19 6538581 6541780 ZNF274 GTRD no Blood (GM12878) 108378509
chr19 6538590 6540375 ZNF274 GTRD no Blood (GM12878) 108378510
chr19 6538591 6541762 ZNF274 GTRD no Blood (GM12878) 108378512
chr19 6538970 6540366 ZNF274 GTRD no Blood (GM12878) 108378513
chr19 6539710 6540314 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21845638
chr19 6539710 6540314 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108378518
chr19 6540186 6540196 MEF2A JASPAR yes 70794795
chr19 6540186 6540196 MEF2A JASPAR yes 112274305
Genes associated with rs79363088[chr19:6540188], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More