EnhancerDB
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  3. rs79401102[chr1:222139239]
Enhancers that have rs79401102[chr1:222139239]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 222129374 222148777 enh27556
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Astrocyte Lung (A549) Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs79401102[chr1:222139239]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 222139030 222141153 AR GTRD no Prostate (PC-3) 21383079
chr1 222139224 222139240 POU4F2 JASPAR yes 35586621
chr1 222139224 222139240 POU4F3 JASPAR yes 35586622
chr1 222139226 222139240 POU4F1 JASPAR yes 35586624
chr1 222139226 222139241 HNF1A JASPAR yes 35586625
chr1 222139227 222139240 HNF1B JASPAR yes 35586626
chr1 222139228 222139240 MEF2A JASPAR yes 35586627
chr1 222139228 222139240 MEF2B JASPAR yes 35586628
chr1 222139228 222139240 MEF2D JASPAR yes 35586629
chr1 222139229 222139239 MEF2A JASPAR yes 35586630
chr1 222139236 222139239 MYB TRANSFAC yes 35586631
Genes associated with rs79401102[chr1:222139239], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More