EnhancerDB
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  3. rs79408678[chr1:46983184]
Enhancers that have rs79408678[chr1:46983184]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 46980604 46997155 enh26675
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Colon (HCT116) Thyroid Lung (PC-9) Pancreas Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs79408678[chr1:46983184]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 46983176 46983188 NHLH1 JASPAR yes 28663679
chr1 46983177 46983187 ID4 JASPAR yes 28663680
chr1 46983177 46983187 NHLH1 JASPAR yes 28663681
chr1 46983177 46983187 TCF3 JASPAR yes 28663682
chr1 46983177 46983187 TCF4 JASPAR yes 28663683
chr1 46983178 46983187 SNAI2 JASPAR yes 28663684
chr1 46983179 46983184 USF2 TRANSFAC yes 28663685
Genes associated with rs79408678[chr1:46983184], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More