EnhancerDB
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  3. rs79430245[chr17:60249778]
Enhancers that have rs79430245[chr17:60249778]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 60237265 60252315 enh17274
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Large Intestine Stomach Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Epithelial (MCF-7)
Transcript factors that have rs79430245[chr17:60249778]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 60247648 60257176 ZNF143 GTRD no Epithelial (MCF-7) 21777818
chr17 60247648 60257176 ZNF143 GTRD no Epithelial (MCF-7) 21777819
chr17 60247648 60257176 ZNF143 GTRD no Epithelial (MCF-7) 108280259
chr17 60247648 60257176 ZNF143 GTRD no Epithelial (MCF-7) 108280260
chr17 60247648 60257176 ZNF143 GTRD no Epithelial (MCF-7) 108280261
chr17 60247648 60257176 ZNF143 GTRD no Epithelial (MCF-7) 108280262
chr17 60247648 60257176 ZNF143 GTRD no Epithelial (MCF-7) 108280263
chr17 60248867 60249984 ZNF143 GTRD no Epithelial (MCF-7) 21777856
chr17 60248867 60249984 ZNF143 GTRD no Epithelial (MCF-7) 108280309
chr17 60249603 60253517 ZNF143 GTRD no Epithelial (MCF-7) 21777859
chr17 60249603 60253517 ZNF143 GTRD no Epithelial (MCF-7) 108280323
chr17 60249632 60249954 ZNF274 GTRD no Bone Marrow (K562) 21777860
chr17 60249773 60249784 HOXC11 JASPAR yes 55189466
chr17 60249773 60249784 HOXC12 JASPAR yes 55189467
chr17 60249773 60249784 HOXC13 JASPAR yes 55189468
chr17 60249773 60249784 HOXD12 JASPAR yes 55189469
chr17 60249774 60249784 HOXC10 JASPAR yes 55189470
chr17 60249774 60249784 HOXD11 JASPAR yes 55189471
chr17 60249778 60249784 TBP TRANSFAC yes 55189472
chr17 60249778 60249792 SPIC JASPAR yes 55189473
Genes associated with rs79430245[chr17:60249778], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More