EnhancerDB
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  3. rs79540502[chr1:201469925]
Enhancers that have rs79540502[chr1:201469925]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201463125 201475335 enh12520
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Large Intestine Bone (Osteoblast) Lung Blood (OCI-LY7) Placenta Muscle (Myoblast) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Heart
chr1 201469668 201470038 vista4554
VISTA
Transcript factors that have rs79540502[chr1:201469925]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201466435 201470115 ZNF143 GTRD no Epithelial (MCF-7) 21364364
chr1 201466435 201470115 ZNF143 GTRD no Epithelial (MCF-7) 107856383
chr1 201466810 201470403 ZNF143 GTRD no Epithelial (MCF-7) 21364365
chr1 201466810 201470403 ZNF143 GTRD no Epithelial (MCF-7) 107856384
chr1 201467268 201469929 ZNF274 GTRD no Cervix (HeLa-S3) 107856385
chr1 201467414 201470119 ZNF143 GTRD no Epithelial (MCF-7) 21364366
chr1 201467414 201470119 ZNF143 GTRD no Epithelial (MCF-7) 107856388
chr1 201467420 201470199 ZNF143 GTRD no Epithelial (MCF-7) 21364367
chr1 201467420 201470199 ZNF143 GTRD no Epithelial (MCF-7) 107856389
chr1 201467436 201470243 ZNF143 GTRD no Epithelial (MCF-7) 21364368
chr1 201467436 201470243 ZNF143 GTRD no Epithelial (MCF-7) 107856390
chr1 201467442 201470108 ZNF143 GTRD no Epithelial (MCF-7) 21364369
chr1 201467442 201470108 ZNF143 GTRD no Epithelial (MCF-7) 107856391
chr1 201467442 201470351 ZNF143 GTRD no Epithelial (MCF-7) 21364370
chr1 201467442 201470351 ZNF143 GTRD no Epithelial (MCF-7) 107856392
chr1 201467473 201470060 ZBTB33 GTRD no Lung (A549) 107856394
chr1 201467479 201470303 ZNF274 GTRD no Cervix (HeLa-S3) 107856395
chr1 201467482 201470109 ZNF143 GTRD no Epithelial (MCF-7) 21364371
chr1 201467482 201470109 ZNF143 GTRD no Epithelial (MCF-7) 107856396
chr1 201467492 201470152 ZNF143 GTRD no Epithelial (MCF-7) 21364373
chr1 201467492 201470152 ZNF143 GTRD no Epithelial (MCF-7) 107856398
chr1 201467516 201470091 ZBTB33 GTRD no Lung (A549) 107856400
chr1 201467527 201470146 ZNF143 GTRD no Epithelial (MCF-7) 21364374
chr1 201467527 201470146 ZNF143 GTRD no Epithelial (MCF-7) 107856401
chr1 201467534 201470208 ZNF143 GTRD no Epithelial (MCF-7) 21364375
chr1 201467534 201470208 ZNF143 GTRD no Epithelial (MCF-7) 107856402
chr1 201467547 201470023 TCF7L2 GTRD no Colon (HCT116) 107856403
chr1 201467575 201469925 ZBTB33 GTRD no Lung (A549) 107856406
chr1 201467584 201470018 ZBTB33 GTRD no Lung (A549) 107856407
chr1 201467601 201470090 TCF7L2 GTRD no Colon (HCT116) 107856409
chr1 201467607 201470346 ZNF143 GTRD no Epithelial (MCF-7) 21364378
chr1 201467607 201470346 ZNF143 GTRD no Epithelial (MCF-7) 107856410
chr1 201467613 201470030 ZBTB33 GTRD no Lung (A549) 107856411
chr1 201467616 201470065 ZNF143 GTRD no Epithelial (MCF-7) 21364379
chr1 201467616 201470065 ZNF143 GTRD no Epithelial (MCF-7) 107856412
chr1 201467654 201470061 ZNF274 GTRD no Blood (GM12878) 107856414
chr1 201467654 201470212 ZNF274 GTRD no Liver (HepG2) 21364381
chr1 201467654 201470212 ZNF274 GTRD no Liver (HepG2) 107856415
chr1 201467666 201470130 TCF7L2 GTRD no Colon (HCT116) 107856417
chr1 201467668 201470069 ZNF274 GTRD no Blood (GM12878) 107856418
chr1 201467671 201470148 ZNF143 GTRD no Epithelial (MCF-7) 21364382
chr1 201467671 201470148 ZNF143 GTRD no Epithelial (MCF-7) 107856419
chr1 201467714 201470217 ZNF274 GTRD no Liver (HepG2) 21364383
chr1 201467714 201470217 ZNF274 GTRD no Liver (HepG2) 107856420
chr1 201467742 201472206 ZNF143 GTRD no Epithelial (MCF-7) 21364384
chr1 201467742 201472206 ZNF143 GTRD no Epithelial (MCF-7) 107856421
chr1 201467750 201470087 ZNF274 GTRD no Liver (HepG2) 21364385
chr1 201467750 201470087 ZNF274 GTRD no Liver (HepG2) 107856422
chr1 201467814 201469960 ZBTB33 GTRD no Lung (A549) 107856424
chr1 201467851 201469933 ZNF143 GTRD no Epithelial (MCF-7) 21364386
chr1 201467851 201469933 ZNF143 GTRD no Epithelial (MCF-7) 107856425
chr1 201467859 201469987 TCF7L2 GTRD no Colon (HCT116) 107856427
chr1 201467919 201470122 ZBTB33 GTRD no Lung (A549) 107856430
chr1 201467922 201470049 ZNF274 GTRD no Blood (GM12878) 107856431
chr1 201467986 201470037 ZNF274 GTRD no Liver (HepG2) 21364388
chr1 201467986 201470037 ZNF274 GTRD no Liver (HepG2) 107856434
chr1 201467987 201470068 ZBTB33 GTRD no Lung (A549) 107856435
chr1 201468095 201470031 ZNF274 GTRD no Blood (GM12878) 107856438
chr1 201468147 201470046 ZBTB33 GTRD no Brain (SK-N-SH) 107856440
chr1 201468179 201469990 ZNF274 GTRD no Cervix (HeLa-S3) 107856442
chr1 201468244 201470169 TCF7L2 GTRD no Colon (HCT116) 107856445
chr1 201468922 201469979 ZNF274 GTRD no Liver (HepG2) 21364395
chr1 201468922 201469979 ZNF274 GTRD no Liver (HepG2) 107856461
chr1 201468980 201469968 SOX2 GTRD no Neural Stem Cells (H9) 21364396
chr1 201468980 201469968 SOX2 GTRD no Neural Stem Cells (H9) 107856462
chr1 201468982 201469952 ZBTB33 GTRD no Lung (A549) 107856463
chr1 201469425 201469944 ZNF274 GTRD no Cervix (HeLa-S3) 107856473
chr1 201469925 201470004 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107856476
Genes associated with rs79540502[chr1:201469925], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More