EnhancerDB
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  3. rs79553933[chr1:178573086]
Enhancers that have rs79553933[chr1:178573086]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 178572424 178586155 enh756
Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Neural Stem Cells (H9) Thymus
Transcript factors that have rs79553933[chr1:178573086]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 178572599 178573291 ZNF274 GTRD no Cervix (HeLa-S3) 21352625
chr1 178573046 178574011 ZNF274 GTRD no Blood (GM12878) 21352627
chr1 178573085 178573093 OTX2 JASPAR yes 33427226
Genes associated with rs79553933[chr1:178573086], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More