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- rs7955401[chr12:52398751]
Enhancers that have rs7955401[chr12:52398751]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr12 |
52395945 |
52402675 |
enh98965 |
|
|
Transcript factors that have rs7955401[chr12:52398751]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr12
|
52398532
|
52400871
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108032778
|
|
|
chr12
|
52398537
|
52399583
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108032779
|
|
|
chr12
|
52398735
|
52398756
|
ZNF263
|
JASPAR
|
yes
|
|
120912676
|
|
|
chr12
|
52398740
|
52398754
|
PLAG1
|
JASPAR
|
yes
|
|
120912678
|
|
|
chr12
|
52398741
|
52398756
|
NR2C2
|
JASPAR
|
yes
|
|
120912679
|
|
|
chr12
|
52398741
|
52398761
|
RREB1
|
JASPAR
|
yes
|
|
120912680
|
|
|
chr12
|
52398742
|
52398752
|
SP1
|
JASPAR
|
yes
|
|
120912682
|
|
|
chr12
|
52398742
|
52398752
|
ZNF740
|
JASPAR
|
yes
|
|
120912683
|
|
|
chr12
|
52398743
|
52398754
|
E2F6
|
JASPAR
|
yes
|
|
120912684
|
|
|
chr12
|
52398747
|
52398757
|
SP1
|
JASPAR
|
yes
|
|
120912685
|
|
|
chr12
|
52398748
|
52398764
|
GLIS1
|
JASPAR
|
yes
|
|
120912686
|
|
|
chr12
|
52398749
|
52398759
|
ZNF740
|
JASPAR
|
yes
|
|
120912687
|
|
|
chr12
|
52398749
|
52398763
|
GLIS2
|
JASPAR
|
yes
|
|
120912688
|
|
|
chr12
|
52398749
|
52398763
|
GLIS3
|
JASPAR
|
yes
|
|
120912689
|
|
|
chr12
|
52398749
|
52398763
|
ZIC1
|
JASPAR
|
yes
|
|
120912690
|
|
|
chr12
|
52398749
|
52398764
|
ZIC4
|
JASPAR
|
yes
|
|
120912691
|
|
Genes associated with rs7955401[chr12:52398751], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |
|
chr12
|
52643084
|
52702947
|
+
|
KRT86
|
ENSG00000170442.7
|
52643084
|
244333
|
Esophagus
|
0.181501
|
12080
|
|