EnhancerDB
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  3. rs796065896[chr17:62679780]
Enhancers that have rs796065896[chr17:62679780]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 62671385 62687563 enh17299
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs796065896[chr17:62679780]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 62679248 62683082 ZNF143 GTRD no Epithelial (MCF-7) 21778916
chr17 62679284 62681253 TCF7L2 GTRD no Colon (HCT116) 21778917
chr17 62679301 62682615 ZNF143 GTRD no Epithelial (MCF-7) 21778918
chr17 62679385 62681238 TCF7L2 GTRD no Colon (HCT116) 21778919
chr17 62679402 62682688 ZNF143 GTRD no Epithelial (MCF-7) 21778920
chr17 62679426 62680481 TCF7L2 GTRD no Colon (HCT116) 21778921
chr17 62679427 62680673 TCF7L2 GTRD no Colon (HCT116) 21778922
chr17 62679445 62681322 TCF7L2 GTRD no Colon (HCT116) 21778923
chr17 62679486 62681239 TCF7L2 GTRD no Colon (HCT116) 21778924
chr17 62679488 62681335 ZNF143 GTRD no Epithelial (MCF-7) 21778925
chr17 62679584 62681248 TCF7L2 GTRD no Colon (HCT116) 21778926
chr17 62679596 62681309 TCF7L2 GTRD no Colon (HCT116) 21778927
chr17 62679606 62681267 TCF7L2 GTRD no Colon (HCT116) 21778928
chr17 62679770 62679784 POU4F1 JASPAR yes 55311117
chr17 62679776 62679791 MEF2A JASPAR yes 55311119
chr17 62679778 62679790 MEF2A JASPAR yes 55311120
chr17 62679779 62679789 MEF2A JASPAR yes 55311121
chr17 62679780 62679788 FOXL1 JASPAR yes 55311122
chr17 62679780 62679791 FOXB1 JASPAR yes 55311123
Genes associated with rs796065896[chr17:62679780], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More