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- rs7965178[chr12:50058687]
Enhancers that have rs7965178[chr12:50058687]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr12 |
50054615 |
50059261 |
enh51206 |
|
|
| chr12 |
50058663 |
50058846 |
vista13350 |
|
|
Transcript factors that have rs7965178[chr12:50058687]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr12
|
50055579
|
50060395
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108030477
|
|
|
chr12
|
50055579
|
50060395
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108030478
|
|
|
chr12
|
50055678
|
50060309
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108030488
|
|
|
chr12
|
50055678
|
50060309
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108030489
|
|
|
chr12
|
50055717
|
50059338
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108030493
|
|
|
chr12
|
50055717
|
50059338
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108030494
|
|
|
chr12
|
50057175
|
50059255
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108030631
|
|
|
chr12
|
50057175
|
50059255
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108030632
|
|
|
chr12
|
50057917
|
50058703
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108030642
|
|
|
chr12
|
50057970
|
50060392
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108030643
|
|
|
chr12
|
50058353
|
50058883
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
108030644
|
|
|
chr12
|
50058372
|
50058846
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108030645
|
|
|
chr12
|
50058442
|
50059452
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
21544766
|
|
|
chr12
|
50058442
|
50059452
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108030646
|
|
|
chr12
|
50058507
|
50059103
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
21544767
|
|
|
chr12
|
50058507
|
50059103
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
108030647
|
|
|
chr12
|
50058613
|
50059133
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
21544768
|
|
|
chr12
|
50058613
|
50059133
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
108030648
|
|
|
chr12
|
50058641
|
50059557
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108030649
|
|
|
chr12
|
50058660
|
50059030
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
21544769
|
|
|
chr12
|
50058660
|
50059030
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
108030650
|
|
|
chr12
|
50058671
|
50059001
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
21544770
|
|
|
chr12
|
50058671
|
50059001
|
BHLHE40
|
UCSC Txn Factor
|
no
|
Conserved
|
108030651
|
|
|
chr12
|
50058671
|
50059001
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
108030652
|
|
|
chr12
|
50058672
|
50058948
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
21544771
|
|
|
chr12
|
50058672
|
50058948
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
108030653
|
|
|
chr12
|
50058673
|
50059003
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
21544772
|
|
|
chr12
|
50058673
|
50059003
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
108030654
|
|
|
chr12
|
50058686
|
50058996
|
POU2F2
|
UCSC Txn Factor
|
no
|
Conserved
|
108030655
|
|
|
chr12
|
50058687
|
50058691
|
NFE
|
TRANSFAC
|
yes
|
|
82400712
|
|
|
chr12
|
50058687
|
50058691
|
NFE
|
TRANSFAC
|
yes
|
|
120791059
|
|
Genes associated with rs7965178[chr12:50058687], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |