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- rs79662529[chr1:200366010]
Enhancers that have rs79662529[chr1:200366010]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr1 |
200355797 |
200367837 |
enh870 |
|
|
Transcript factors that have rs79662529[chr1:200366010]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr1
|
200365717
|
200366310
|
SOX2
|
GTRD
|
no
|
Neural Stem Cells (H9)
|
21363454
|
|
|
chr1
|
200365805
|
200366084
|
SOX2
|
GTRD
|
no
|
Neural Stem Cells (H9)
|
21363455
|
|
|
chr1
|
200365809
|
200366225
|
SOX2
|
GTRD
|
no
|
Neural Stem Cells (H9)
|
21363456
|
|
|
chr1
|
200365816
|
200366284
|
SOX2
|
GTRD
|
no
|
Neural Stem Cells (H9)
|
21363457
|
|
|
chr1
|
200365821
|
200366231
|
SOX2
|
GTRD
|
no
|
Neural Stem Cells (H9)
|
21363458
|
|
|
chr1
|
200365876
|
200366039
|
SOX2
|
GTRD
|
no
|
Neural Stem Cells (H9)
|
21363459
|
|
|
chr1
|
200366008
|
200366029
|
IRF1
|
JASPAR
|
yes
|
|
34444426
|
|
|
chr1
|
200366010
|
200366025
|
IRF9
|
JASPAR
|
yes
|
|
34444427
|
|
Genes associated with rs79662529[chr1:200366010], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |