EnhancerDB
  1. Home
  2. SNP
  3. rs79724016[chr1:42137311]
Enhancers that have rs79724016[chr1:42137311]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42121525 42155124 enh11793
Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs79724016[chr1:42137311]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42137302 42137311 SP1 TRANSFAC yes 28408103
chr1 42137303 42137311 SP1 TRANSFAC yes 28408104
chr1 42137306 42137317 TFAP2A JASPAR yes 28408105
Genes associated with rs79724016[chr1:42137311], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More