EnhancerDB
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  3. rs79800560[chr1:220543531]
Enhancers that have rs79800560[chr1:220543531]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 220534493 220550315 enh12681
Prostate (PC-3) Kidney Epithelial (MCF-7) Cervix (HeLa-S3) Prostate (RWPE1) Brain (SK-N-MC) Esophagus Astrocyte Brain (SK-N-SH) Bone (Osteoblast) Muscle (A673) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs79800560[chr1:220543531]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 220543282 220543752 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21381685
chr1 220543293 220543823 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21381686
chr1 220543379 220543531 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21381687
chr1 220543467 220543622 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21381689
chr1 220543508 220543838 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21381690
chr1 220543511 220543532 ZNF263 JASPAR yes 35489371
chr1 220543512 220544042 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21381691
chr1 220543531 220543536 MYB TRANSFAC yes 35489372
Genes associated with rs79800560[chr1:220543531], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More