EnhancerDB
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  3. rs79852270[chr6:109671779]
Enhancers that have rs79852270[chr6:109671779]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 109652045 109675195 enh23490
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Brain (SK-N-SH) Lung Stomach Muscle (A673) Placenta Thyroid Lung (PC-9) Pancreas Spleen Heart
Transcript factors that have rs79852270[chr6:109671779]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 109671777 109671788 CDX2 JASPAR yes 104246924
chr6 109671778 109671789 HOXA10 JASPAR yes 104246925
chr6 109671778 109671789 HOXC11 JASPAR yes 104246926
chr6 109671778 109671789 HOXC12 JASPAR yes 104246927
chr6 109671778 109671789 HOXC13 JASPAR yes 104246928
chr6 109671778 109671789 HOXD12 JASPAR yes 104246929
chr6 109671779 109671788 CDX1 JASPAR yes 104246930
chr6 109671779 109671789 HOXA13 JASPAR yes 104246931
chr6 109671779 109671789 HOXB13 JASPAR yes 104246932
chr6 109671779 109671789 HOXC10 JASPAR yes 104246933
chr6 109671779 109671789 HOXD11 JASPAR yes 104246934
chr6 109671779 109671789 HOXD13 JASPAR yes 104246935
Genes associated with rs79852270[chr6:109671779], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More