EnhancerDB
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  3. rs79873716[chr1:42229859]
Enhancers that have rs79873716[chr1:42229859]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42213671 42252455 enh291
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs79873716[chr1:42229859]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42229840 42229861 IRF1 JASPAR yes 28419305
chr1 42229846 42229861 FOXP1 JASPAR yes 28419310
chr1 42229846 42229867 IRF1 JASPAR yes 28419311
Genes associated with rs79873716[chr1:42229859], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More