EnhancerDB
  1. Home
  2. SNP
  3. rs80142270[chr1:54874690]
Enhancers that have rs80142270[chr1:54874690]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 54866345 54877955 enh11868
Bone Marrow (K562) Cervix (HeLa-S3) Large Intestine Blood (T-cell) Esophagus Blood (OCI-LY7) Placenta Peripheral Blood (MM.1S) Embryonic Stem Cell Line (H1-hESC) Uterus Thymus
Transcript factors that have rs80142270[chr1:54874690]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 54873803 54876283 AR GTRD no Prostate (PC-3) 107805050
chr1 54874684 54874696 GLI2 JASPAR yes 28983214
chr1 54874684 54874702 NFYA JASPAR yes 28983215
Genes associated with rs80142270[chr1:54874690], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More