EnhancerDB
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  3. rs80253360[chr1:230888418]
Enhancers that have rs80253360[chr1:230888418]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 230883525 230890435 enh67310
Prostate (PC-3) Liver (HepG2) Thyroid Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Neural Stem Cells (H9)
chr1 230886439 230890074 vista145
VISTA
Transcript factors that have rs80253360[chr1:230888418]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 230888406 230888420 ZIC1 JASPAR yes 36062852
chr1 230888406 230888420 ZIC1 JASPAR yes 71161775
chr1 230888409 230888422 TFAP2B JASPAR yes 36062853
chr1 230888409 230888422 TFAP2C JASPAR yes 36062854
chr1 230888409 230888422 TFAP2B JASPAR yes 71161776
chr1 230888409 230888422 TFAP2C JASPAR yes 71161777
chr1 230888412 230888431 REST JASPAR yes 36062855
chr1 230888412 230888431 REST JASPAR yes 71161778
chr1 230888415 230888434 PAX5 JASPAR yes 36062856
chr1 230888415 230888434 PAX5 JASPAR yes 71161779
chr1 230888417 230888421 LFA1 TRANSFAC yes 36062857
chr1 230888417 230888421 LFA1 TRANSFAC yes 71161780
Genes associated with rs80253360[chr1:230888418], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More