EnhancerDB
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  3. rs80275977[chr1:42674220]
Enhancers that have rs80275977[chr1:42674220]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42666765 42684795 enh11799
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Esophagus Astrocyte Liver Bone (Osteoblast) Placenta Lung (PC-9) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs80275977[chr1:42674220]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42674217 42674227 RORA JASPAR yes 28448162
chr1 42674218 42674229 ESRRA JASPAR yes 28448163
chr1 42674218 42674229 ESRRB JASPAR yes 28448164
chr1 42674218 42674231 NR2F1 JASPAR yes 28448165
chr1 42674220 42674228 NR4A2 JASPAR yes 28448166
Genes associated with rs80275977[chr1:42674220], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More