EnhancerDB
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Enhancers that have rs80299296[chr17:64947835]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 64937699 64952845 enh17319
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Muscle (A673) Placenta Thyroid Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Breast Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
chr17 64947420 64948018 vista25617
VISTA
Transcript factors that have rs80299296[chr17:64947835]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 64947533 64948203 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21781981
chr17 64947533 64948203 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108285147
chr17 64947603 64948301 TCF7L2 GTRD no Colon (HCT116) 108285148
chr17 64947603 64948301 TCF7L2 GTRD no Colon (HCT116) 108285149
chr17 64947610 64948002 ZNF143 GTRD no Epithelial (MCF-7) 21781982
chr17 64947610 64948002 ZNF143 GTRD no Epithelial (MCF-7) 108285150
chr17 64947755 64947896 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21781983
chr17 64947755 64947896 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108285151
Genes associated with rs80299296[chr17:64947835], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More